BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D05SP1|AL429890
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig902 200 4e-51
>3x_Contig902
Length = 2936
Score = 200 bits (96), Expect = 4e-51
Identities = 205/240 (85%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 629 ataatattactttcttcccttaatactttcctattatacaccttcctattcataaattta 688
||||||||||||||| ||||||||||||||| || ||||||| |||||| || ||||| |
Sbjct: 2076 ataatattactttctgcccttaatactttccgatgatacaccgtcctatgcagaaattga 2135
Query: 689 ttaactcccactactttcattatttattttttcttatacatttctaaataataattaatt 748
| ||||||||||||||||| |||| ||| || ||||||| ||||| || || ||||
Sbjct: 2136 tgaactcccactactttcagtattgattgggtcggatacattgctaaagaagaagtaatg 2195
Query: 749 tataatcaaaattttttcaaatcactacatacttttttattaatattcaatatacataaa 808
|||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||
Sbjct: 2196 gataatcaaaattttgtcaaatcactacatacgttttgatgaatatgcaatatacataaa 2255
Query: 809 aattatccttacttcatatcactttaaa-atatacatattcacaattcaatttaattatt 867
||| |||| ||||||||||||| | ||| | |||||||||||||| |||| |||| ||||
Sbjct: 2256 aatgatccgtacttcatatcacgtgaaacagatacatattcacaagtcaagttaagtatt 2315
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,865
Number of Sequences: 1807
Number of extensions: 11865
Number of successful extensions: 528
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.4 bits)